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  1. The Virtual Brain
  2. TVB-684 New but not urgent functionality
  3. TVB-844

Create uploaders that would read and store a PsiTable / NerfTable.

    Details

    • Type: Sub-task
    • Status: Closed
    • Priority: Critical
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 1.0.2
    • Labels:
      None

      Description

      Hi Lia,

      The visualizer for the complex coherence is functional.
      For the new release there is also the new global index (kuramoto index) although it
      needs two state variables to work.
      There are two new models as well: Wong and Wang, and the Brunel and Wang model.
      For the latter I created the lookup_tables datatypes.
      The Brunel and Wang model together woth the lokkup tables datatypes runs
      in console mode. Through the interface some storage errors raise
      (file attached).
      How the storage/uplaoding of these datatypes should be handled?
      The tables are stored in tvb/simulator/files/tables

      Thank you,
      Paula

      Hi Paula,

      Unfortunately what you are trying to do is not supported in a non-console mode. The way the new lookup_tables datatype should probably be incorporated into the flow of the web framework is similar to what we do with the default data that is being uploaded on the creation of every new project.
      For this we would need uploaders that would read and store a PsiTable / NerfTable, they could then be fired automatically with the default data from the simulator on project creation. The lookup_table datatypes should also appear in the simulator interface under the Brunel and Wang model and get submitted from there similar to the connectivity field.
      Unfortunately the code freeze is very close and there is no time to do this properly. Do you think it would be acceptable for the current release to just hide the Brunel and Wang model from the Web interface and just let it be accessible through the IDLE console?

      All the best,
      Bogdan

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            • Assignee:
              bogdan.neacsa Bogdan Neacsa
              Reporter:
              lia.domide Lia Domide
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