Details
-
Sub-task
-
Status: Closed
-
Major
-
Resolution: Fixed
-
0.9.6, 0.9.7, 0.9.8, 0.9.9, 0.9.10
-
OS : Centos 6.3, 64-bit
Web browser : Google Chrome Version 22.0.1229.79
TVB: V 0.9.10, downloaded 4/10/2012
Description
TVB Developers,
It appears the TVB software is incompatible with the aforementioned linux OS, as well as ubuntu 12.04. I was curious whether TVB has been tested on either ubuntu or CENTOS.
I executed the commmand tvb_start.sh (after executing tvb_clean.sh) in a terminal and the web interface will not load. The latest version I know that supported Ubuntu Linux OS was 0.9.4-0.9.5. Thanks
I received the following error text:
[Errno 98] Address already in use
Binding failed on port 8080.
[Errno 98] Address already in use
Binding failed on port 8081.
Found the first free port: 8082.
[alistair@atlantic TVB_Distribution]$ Could not find platform independent libraries <prefix>
Could not find platform dependent libraries <exec_prefix>
Consider setting $PYTHONHOME to <prefix>[:<exec_prefix>]
Error WebSocketServer 9000([Errno 98] Address already in use)
CherryPy Checker:
The config entry 'tools.buffet_genshi.on' may be invalid, because the 'buffet_genshi' tool was not found.
section: [/]
Error showing url: Operation not supported
I found the log files:
cherrypy.log:
2012-10-04 15:43:44,701 - INFO - cherrypy.error - [04/Oct/2012:15:43:44] ENGINE
Bus STARTING
2012-10-04 15:43:44,716 - INFO - cherrypy.error - [04/Oct/2012:15:43:44] ENGINE
Started monitor thread '_TimeoutMonitor'.
2012-10-04 15:43:44,819 - INFO - cherrypy.error - [04/Oct/2012:15:43:44] ENGINE
Serving on 0.0.0.0:8082
2012-10-04 15:43:44,819 - INFO - cherrypy.error - [04/Oct/2012:15:43:44] ENGINE
Bus STARTED
& web_application.log:
2012-10-04 15:43:23,188 - INFO - tvb.interfaces.web.mplh5.mplh5server - MPLH5 back-end server started.
2012-10-04 15:43:24,892 - INFO - tvb.interface.web.run - TVB application running using encoding: utf-8
2012-10-04 15:43:30,333 - INFO - tvb.core.adapters.introspector - tvb.adapters.creators.local_connectivity_creator will be stored new in DB
2012-10-04 15:43:30,462 - INFO - tvb.core.adapters.introspector - tvb.adapters.creators.stimulus_creator will be stored new in DB
2012-10-04 15:43:30,603 - INFO - tvb.core.adapters.introspector - tvb.adapters.creators.stimulus_creator will be stored new in DB
2012-10-04 15:43:33,970 - INFO - tvb.core.adapters.introspector - tvb.adapters.analyzers.cross_correlation_adapter will be stored new in DB
2012-10-04 15:43:34,134 - INFO - tvb.core.adapters.introspector - tvb.adapters.analyzers.fourier_adapter will be stored new in DB
2012-10-04 15:43:34,284 - INFO - tvb.core.adapters.introspector - tvb.adapters.analyzers.metrics_group_timeseries will be stored new in DB
2012-10-04 15:43:34,471 - INFO - tvb.core.adapters.introspector - tvb.adapters.analyzers.node_coherence_adapter will be stored new in DB
2012-10-04 15:43:34,653 - INFO - tvb.core.adapters.introspector - tvb.adapters.analyzers.node_covariance_adapter will be stored new in DB
2012-10-04 15:43:34,820 - INFO - tvb.core.adapters.introspector - tvb.adapters.analyzers.pca_adapter will be stored new in DB
2012-10-04 15:43:34,986 - INFO - tvb.core.adapters.introspector - tvb.adapters.analyzers.ica_adapter will be stored new in DB
2012-10-04 15:43:35,185 - INFO - tvb.core.adapters.introspector - tvb.adapters.analyzers.variance_of_node_variance_adapter will be stored new in DB
2012-10-04 15:43:35,366 - INFO - tvb.core.adapters.introspector - tvb.adapters.analyzers.variance_global_adapter will be stored new in DB
2012-10-04 15:43:35,538 - INFO - tvb.core.adapters.introspector - tvb.adapters.analyzers.wavelet_adapter will be stored new in DB
2012-10-04 15:43:35,855 - INFO - tvb.core.adapters.introspector - tvb.adapters.uploaders.cff_importer will be stored new in DB
2012-10-04 15:43:36,032 - INFO - tvb.core.adapters.introspector - tvb.adapters.uploaders.gifti_surface_importer will be stored new in DB
2012-10-04 15:43:36,198 - INFO - tvb.core.adapters.introspector - tvb.adapters.uploaders.gifti_timeseries_importer will be stored new in DB
2012-10-04 15:43:36,360 - INFO - tvb.core.adapters.introspector - tvb.adapters.uploaders.nifti_importer will be stored new in DB
2012-10-04 15:43:36,535 - INFO - tvb.core.adapters.introspector - tvb.adapters.uploaders.projection_matrix_importer will be stored new in DB
2012-10-04 15:43:36,723 - INFO - tvb.core.adapters.introspector - tvb.adapters.uploaders.projection_matrix_importer will be stored new in DB
2012-10-04 15:43:36,889 - INFO - tvb.core.adapters.introspector - tvb.adapters.uploaders.region_mapping_importer will be stored new in DB
2012-10-04 15:43:37,056 - INFO - tvb.core.adapters.introspector - tvb.adapters.uploaders.sensors_importer will be stored new in DB
2012-10-04 15:43:37,222 - INFO - tvb.core.adapters.introspector - tvb.adapters.uploaders.tvb_importer will be stored new in DB
2012-10-04 15:43:37,414 - INFO - tvb.core.adapters.introspector - tvb.adapters.uploaders.zip_connectivity_importer will be stored new in DB
2012-10-04 15:43:37,572 - INFO - tvb.core.adapters.introspector - tvb.adapters.uploaders.zip_surface_importer will be stored new in DB
2012-10-04 15:43:38,028 - INFO - tvb.core.adapters.introspector - tvb.adapters.simulator.simulatorAdapter will be stored new in DB
2012-10-04 15:43:38,347 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.brain will be stored new in DB
2012-10-04 15:43:38,530 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.brain will be stored new in DB
2012-10-04 15:43:38,691 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.eegMonitor will be stored new in DB
2012-10-04 15:43:38,862 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.connectivity will be stored new in DB
2012-10-04 15:43:39,016 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.histogram will be stored new in DB
2012-10-04 15:43:39,174 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.eegMonitor will be updated
2012-10-04 15:43:39,279 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.mplh5_fourier_spectrum will be stored new in DB
2012-10-04 15:43:39,424 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.mplh5_timeseries will be stored new in DB
2012-10-04 15:43:39,585 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.mplh5_topographic will be stored new in DB
2012-10-04 15:43:39,999 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.mplh5_wavelet_spectrogram will be stored new in DB
2012-10-04 15:43:40,190 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.parameter_space_exploration will be stored new in DB
2012-10-04 15:43:40,363 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.pca will be stored new in DB
2012-10-04 15:43:40,561 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.cross_correlation will be stored new in DB
2012-10-04 15:43:40,723 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.cross_coherence will be stored new in DB
2012-10-04 15:43:40,903 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.time_series will be stored new in DB
2012-10-04 15:43:41,199 - INFO - tvb.core.adapters.introspector - tvb.adapters.visualizers.covariance will be stored new in DB
2012-10-04 15:43:42,727 - ERROR - tvb.core.adapters.introspector - No group having class=MatlabAdapter stored for portlet ISOSTOPO.
2012-10-04 15:43:42,735 - ERROR - tvb.core.adapters.introspector - No group having class=MatlabAdapter stored for portlet DBIN.
2012-10-04 15:43:42,742 - ERROR - tvb.core.adapters.introspector - No group having class=MatlabAdapter stored for portlet CCBU.
2012-10-04 15:43:42,750 - ERROR - tvb.core.adapters.introspector - No group having class=MatlabAdapter stored for portlet ISOS.
2012-10-04 15:43:42,756 - ERROR - tvb.core.adapters.introspector - No group having class=MatlabAdapter stored for portlet STW.
2012-10-04 15:43:42,762 - ERROR - tvb.core.adapters.introspector - No group having class=MatlabAdapter stored for portlet NBCB.