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  1. The Virtual Brain
  2. TVB-2123

Sim run method should produce TS objects

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    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Major
    • Resolution: Won't Fix
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: TVB-Simulator
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      Description

      The simulator run method is a convenience to collect all monitor output. It should return time series objects where applicable instead of pairs of numpy arrays for (time, data).

      (the rest of this probably out of scope and require other issues)

      Additionally, we should offer convenience methods on TimeSeries objects to convert them into equivalent nitime, mne-python, pandas and other packages' data structures. Look at deeper integration with their time series data structure

      In future we need better integration of EEG/MEG with MNE-Python, and NiTime/NiPy for fMRI.

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            • Assignee:
              marmaduke.woodman Marmaduke Woodman
              Reporter:
              marmaduke.woodman Marmaduke Woodman
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