Details

    • Type: Sub-task
    • Status: Closed
    • Priority: Blocker
    • Resolution: Fixed
    • Affects Version/s: 1.2, 1.2.1
    • Fix Version/s: 1.2.2
    • Component/s: TVB Framework
    • Labels:
    • Sprint:
      Post-1.2.1

      Description

      After today's dicsussion with Mihai we realised that the Local Connectivity creator might not be giving the correct matrix, that is, is yieldining only the geodesic distance matrix.

      Paula:
      In surfaces_scientific.py --> CortexScientific – compute_local_connectivity

      Line 704
      self.local_connectivity.compute() # Evaluate equation based distance

      This line computes the spatial profile of the local connectivity, and in principle should replace the geodesic distance matrix, with a new one.

      Hower after having a look at the local connectivity creator.
      It is only computing the geodesic distance via the compute+sparse matrix method.
      Because of the checks that exist in the "configure" method in CortexScientific, the method "compute_local_connectivity" is never reached...

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            • Assignee:
              paula.sanz-leon Paula Sanz Leon
              Reporter:
              paula.sanz-leon Paula Sanz Leon
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                Resolved:

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