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  1. The Virtual Brain
  2. TVB-1144

Acomodate CFF importer to support Duke Shereen's data

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    Details

    • Type: Task
    • Status: Closed
    • Priority: Blocker
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 1.1.1, 1.2.3
    • Component/s: None
    • Labels:
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      Description

      Hi Lia,

      Yes, I like the CFF format also. Here is a link to one particular CFF I'm trying to import:

      https://www.dropbox.com/s/15u5gnud51sp5k6/NM-MIR-022_tp1.cff

      Our main goal of using this CFF is to upload the structural connectivity into TVB, i.e. the gpickle files located in the CNetwork directory with appropriate labeling from the volume rois.

      As always, thank you kindly for your help,

      Duke

      On Tue, Jan 7, 2014 at 2:17 AM, Lia Domide <lia.domide@codemart.ro> wrote:
      Hi Duke,

      CFF is a good format, but it is so generic that there are multiple CFF forms in which the same data can be represented.
      Could you, please share with me one particular CFF you are trying to import and which is not working ?
      Then I will be able to give a clear answer, or possibly improve our import mechanism to accommodate your needs.

      Happy New Year!

      Lia.

      On 07 Jan 2014, at 03:50, Duke Shereen <adshereen@gmail.com> wrote:

      Hi Lia,

      I hope you are well.

      I have been trying recently to import cff files created from the Connectome Mapper Toolkit into TVB in order to load the structural connectivity matrices. I am having difficulty with it, have you any hints as to how to make it work?

      Happy belated New Year,

      Duke

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              Assignee:
              lia.domide Lia Domide
              Reporter:
              lia.domide Lia Domide
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